Tag: Texas A&M AgriLife Research

  • $5.2 Million Grant for Short-Day Onion Improvement

    Texas A&M AgriLife Research received more than $5.2 million in grant funding from the U.S. Department of Agriculture’s National Institute of Food and Agriculture for a project to address multiple aspects of the southern U.S. onion harvest system, serving more than just Texas, but also short-day onion growing areas such as California, New Mexico and Georgia.

    Subas Malla, Ph.D., Texas A&M AgriLife Research associate professor at the Texas A&M AgriLife Research and Extension Center in Uvalde, will serve as director for a short-day onion project. (Texas A&M AgriLife photo by Paul Schattenberg)

    The director for the “Ensuring Future Economic Viability of U.S. Short-Day Onion Production Through Mechanical Harvesting” project will be Subas Malla, Ph.D. Malla is an AgriLife Research associate professor of vegetable breeding at the Texas A&M AgriLife Research and Extension Center in Uvalde.

    The Texas A&M AgriLife team is comprised of Stephen Searcy, Ph.D., Professor Emeritus and former head of the Department of Biological and Agricultural Engineering, Bryan-College Station; Juan  Anciso, Ph.D., professor and Texas A&M AgriLife Extension Service vegetable specialist, Weslaco; Francisco Abello, Ph.D., assistant professor and AgriLife Extension economist – management, Vernon; and Larry Stein, Ph.D., professor, Regents Fellow and associate head of the Department of Horticultural Sciences, Uvalde. The University of California, the University of Georgia and New Mexico State University will also partner on the project.

    Searcy will serve as co-director and lead the project’s agricultural engineering research. Anciso and Abello will lead the AgriLife Extension and economic analysis components, respectively.

    “The goal of this proposal is to improve profitability and ultimately market share for short-day onions by mechanizing short-day onion harvesting,” Malla said. “We intend to do this through development and selection of cultivars, optimization of production practices, improved harvest systems, and communication of the associated socioeconomic benefits to growers and packers.”

    Short-day Onions Long on Production Challenges

    The majority of onions grown across the southern region of the U.S. are short-day onions. Short-day onions require about 10-12 hours of daylight to produce bulbs, while long-day onions require 14-16 hours.

    In 2023, the fresh market onion industry grew a total of 75,460 tons across 7,158 acres in 35 South Texas counties. (Texas A&M AgriLife photo by Laura McKenzie)

    According to South Texas Growers Inc., a wholesale nursery, in 2023, the state’s fresh market onion industry — sweet, yellow, red and white onions combined — grew a total of 75,460 tons across 7,158 acres in the 35 South Texas counties. The average farm-gate value of those onions is around $39 million

    Short-day onions are a high-value vegetable crop in many southern U.S. states, including Texas, but their biology and structure present some difficulties, especially during harvest.

    Onion harvesters developed for long-day onions in northern states have been tested with short-day onions, Searcy said, but growers judged the results to be less than satisfactory.

    “Dry matter content in the short-day sweet onion is low but the water content is high,” Malla said. “Due to the high water content in the bulb, there is a greater likelihood of bruise damage since the bulbs can’t withstand a higher-pressure impact when harvested. That is why short-day onions have traditionally been harvested by hand.”

    In efforts to use mechanized harvesting, too many bulbs were damaged to be acceptable for the fresh market, he said.

    “However, these past attempts were limited to substituting the mechanical harvester for manual labor and did not involve a whole-system approach.”

    The new project aimed at mechanizing harvest will involve the whole system and include short-day onion areas in Georgia, Texas, New Mexico and California to represent a full range of growing conditions.

    “Limited availability and increasing cost of labor has resulted in decreased U.S. short-day onion production and a lack of competitiveness with foreign sources,” Malla said. “A viable mechanized harvest system is a high priority for growers and the industry.”

    Building a Better Short-Day Onion Harvest System

    Malla said the project will address the many facets of developing a successful harvest system. These include:

    –  Identifying cultivars and production practices suitable for mechanical harvesting.

    –  Modifying the harvest system to minimize the potential damage to onion bulbs.

    –  Evaluating the influence of mechanical harvest on profitability and risk faced by onion growers.

    –  Communicating the benefits and drawbacks of adopting mechanical harvesting to growers.

    Malla said the adoption of any advances by growers will rely on partnerships with equipment manufacturers, seed companies and technology providers. A stakeholder advisory panel and scientific advisers will participate in the project’s proposed research and outreach activities.

    “We are already in the process of evaluating diverse Texas A&M onion germplasm to understand the genetic mechanism of host resistance against diseases and insects,” Malla said. “We are working with the Texas A&M Vegetable and Fruit Improvement Center to test bulb quality and storability in onions. We are also testing Texas A&M onion germplasm in a way that will help shorten the cultivar development cycle.”

    To his knowledge, Malla said, this project is one of the broadest and most comprehensive ever undertaken to address the many challenges to short-day onion production.

    “Our ultimate goal is identifying the best cultivars and improving the short-day onion harvest system in a way that provides better results and better profitability for the producer,” he said.

  • New Sensor Chip Advances Rapid, Cost-Effective Disease Diagnostics

    Texas A&M AgriLife Research scientists and collaborators at Iowa State University have developed a sensor chip that can detect many disease pathogens with 10 times the sensitivity of currently available methods.

    The chip also eliminates the need for chemical dye reagents typically used in the diagnostic process. The new technology shows promise for rapid, low-cost point-of-care diagnostic capabilities in plants, foods, animals and humans, including detecting foodborne pathogens, bird flu and COVID-19.

    An abstract diagram showing the basic configuration of the LAMP reaction chamber and nanopore film sensor containing immobilized LAMP products (Texas A&M AgriLife Illustration)

    Results from the new sensor are available in about 30 minutes.

    In their research, published in ASC Sensors, scientists used the new sensor to detect Phytophthora infestansThe pathogen causes globally devastating late blight disease — a particular threat to potato and tomato crops.

    The research was co-led by Jinping Zhao, Ph.D., AgriLife Research postdoctoral research scientist in Dallas, and Subin Mao, a Ph.D. candidate in electrical and computer engineering at Iowa State University. Serving as corresponding authors were collaborators Junqi Song, Ph.D., associate professor and plant immunity research lead with AgriLife Research in Dallas, and Long Que, Ph.D., professor of electrical engineering at Iowa State University. Seed grants from each university funded the research.

    “This research advances technologies that have emerged as some of our greatest opportunities for improving agriculture, food safety and human health,” Song said. “Our publication represents a step toward realizing these powerful tools against diseases.”

    Building on existing technologies

    The new sensor improves upon a technique known as loop-mediated isothermal amplification, or LAMP, which is widely used to detect pathogens by amplifying their DNA.

    Detection of LAMP products amplified from templates, such as pathogen DNA, often requires that the products be “labeled” by using fluorescence dyes — a costly process with low sensitivity. The new sensor diagnoses pathogens without such reagents and at high sensitivity. It also eliminates a lengthy DNA purification process that creates challenges for point-of-care use.

    The new chip consists of a nanopore thin-film sensor inside a special reaction chamber. Primers are uniquely designed to be immobilized on the nanofilm, causing amplified LAMP products to become bound to the sensor, which produces signals that can be directly and easily measured with a portable spectrometer.

    What’s next

    The LAMP chip offers a new portable platform to detect pathogens using label-free sensors with ultrasensitivity. The research team will now work to further enhance sensitivity to a subattomolar or even lower level.

    The team aims to offset current challenges to detecting and distinguishing pathogen species and strains with high-sequence similarities. They will also work to improve the specificity of detections and establish quantitative detection by integrating artificial intelligence and CRISPR gene-editing technologies.

    Their goal is to achieve a viable product for broad adoption in plant, animal and human health point-of-care applications.